Package index

All functions

get_conf_metrics()

Calculate diagnostics

make_env_clust_df()

Add explanatory (environmental) variables to 'site' dataframe.

make_env_corr()

Generate correlation matrix and select variables to remove

make_rf_diagnostics()

Run random forest, returning only diagnostic values.

make_rf_diagnostics_old()

Run random forest, usually returning only diagnostic values.

make_rf_diagnostics_spatialcv()

Run random forest, returning only diagnostic values from spatial cross validation.

make_rf_good()

Iteratively add trees to random forest until predictions stabilise

reduce_env()

Reduce number of environmental variables